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  5. Sro211_g087850.1

Sro211_g087850.1 (Contig2667.g21577)


Aliases : Contig2667.g21577

Description : Elongation factor 1-alpha (Fragment)


Gene families : OG_01_0000147 (OrthoFinder) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Sro211_g087850.1
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
EOD35459 No alias Putative EF-1 alpha/Tu like protein [Ensembl]. 0.01 OrthoFinder
SymbC1.scaffold16515.1 16515.1 Transcription factor, GTP-binding domain [Interproscan]. 0.01 OrthoFinder
TP05G05990.1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.02 OrthoFinder
XM_003060913.1 MicpuC2_49684, 49684 Transcription factor, GTP-binding domain; Translation... 0.01 OrthoFinder
lcl|LHPG02000012.1_cds_PRW45078.1_1708 PRW45078 HBS1 isoform X1 isoform A 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004363 glutathione synthase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006749 glutathione metabolic process IEP Enrichment
BP GO:0006750 glutathione biosynthetic process IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0009916 alternative oxidase activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR004160 Transl_elong_EFTu/EF1A_C 305 410
IPR004161 EFTu-like_2 228 297
IPR000795 T_Tr_GTP-bd_dom 7 210
No external refs found!