1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro2071_g313390.1

Sro2071_g313390.1 (Contig4578.g34173)


Aliases : Contig4578.g34173

Description : D-alanine--D-alanyl carrier protein ligase


Gene families : OG_01_0000117 (OrthoFinder) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2071_g313390.1
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
Sro1646_g288320.1 Contig464.g6223 D-alanine--D-alanyl carrier protein ligase 0.02 OrthoFinder
Sro193_g082600.1 Contig826.g9159 D-alanine--D-alanyl carrier protein ligase 0.03 OrthoFinder
Sro571_g168620.1 Contig3541.g27375 AMP-dependent synthetase/ligase [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0016540 protein autoprocessing IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 13 435
No external refs found!