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  5. Sro2061_g312940.1

Sro2061_g312940.1 (Contig1296.g12032)


Aliases : Contig1296.g12032

Description : Protein HGH1 homolog


Gene families : OG_01_0003447 (OrthoFinder) Phylogenetic Tree(s): OG0003447_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2061_g312940.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Cz06g01050.t1 No alias Protein HGH1 N-terminal [Interproscan]. 0.03 OrthoFinder
OT_08G02430.1 No alias Protein HGH1 N-terminal [Interproscan]. 0.07 OrthoFinder
Sro2483_g328920.1 Contig3811.g29192 Protein HGH1 homolog 0.03 OrthoFinder
TP19G00580.1 No alias Protein HGH1 C-terminal; Transcription factor IIS,... 0.04 OrthoFinder
Transcript_contig_1059 1059 Hypothetical protein 0.05 OrthoFinder
Vocar.0001s1332.1 32884972 Protein HGH1 N-terminal [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01001276.1_cds_GFH18276.1_12753 HaLaN_15050, GFH18276 Protein HGH1 N-terminal [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004408 holocytochrome-c synthase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR007205 Protein_HGH1_N 1 111
IPR007206 Protein_HGH1_C 117 170
No external refs found!