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  5. Sro2044_g312370.1

Sro2044_g312370.1 (Contig1368.g12582)


Aliases : Contig1368.g12582

Description : SET domain


Gene families : OG_01_0000019 (OrthoFinder) Phylogenetic Tree(s): OG0000019_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2044_g312370.1

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000718.25 tig00000718_g3700.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000737.18 tig00000737_g3797.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00020554.66 tig00020554_g10847.t1 No description available 0.02 OrthoFinder
Cz04g25210.t1 No alias Hypothetical protein 0.01 OrthoFinder
Dusal.0021s00034.1 33197781 SET domain [Interproscan]. 0.02 OrthoFinder
OT_15G00020.1 No alias SET domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_59153 59153 SET domain [Interproscan]. 0.02 OrthoFinder
XM_003060566.1 MicpuC2_59996, 59996 SET domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006013 mannose metabolic process IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR002893 Znf_MYND 451 490
IPR001214 SET_dom 119 183
No external refs found!