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  5. Sro203_g085600.1

Sro203_g085600.1 (Contig1270.g11854)


Aliases : Contig1270.g11854

Description : Copine-3


Gene families : OG_01_0104038 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro203_g085600.1
Cluster HCCA: Cluster_138


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0006914 autophagy IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0017069 snRNA binding IEP Enrichment
MF GO:0017070 U6 snRNA binding IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
MF GO:0030623 U5 snRNA binding IEP Enrichment
BP GO:0030638 polyketide metabolic process IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
MF GO:0043531 ADP binding IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0061919 process utilizing autophagic mechanism IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
InterPro domains Description Start Stop
IPR000008 C2_dom 15 114
IPR000008 C2_dom 232 297
IPR000008 C2_dom 601 698
IPR000008 C2_dom 766 865
IPR000008 C2_dom 985 1078
IPR000008 C2_dom 1771 1865
IPR000008 C2_dom 434 529
No external refs found!