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  5. Sro2031_g311851.1

Sro2031_g311851.1


Description : Leucine-rich repeat [Interproscan].


Gene families : OG_01_0000236 (OrthoFinder) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro2031_g311851.1
Cluster HCCA: Cluster_306

Target Alias Description ECC score Gene Family Method Actions
Sro1423_g271380.1 Contig94.g1083 LRR receptor-like serine threonine-protein kinase 0.04 OrthoFinder
Sro2124_g315620.1 Contig3835.g29498 Hypothetical protein 0.05 OrthoFinder
Sro2962_g341020.1 Contig3799.g29139 Hypothetical protein 0.03 OrthoFinder
Sro406_g136371.1 No alias Hypothetical protein 0.04 OrthoFinder
Sro522_g159560.1 Contig3319.g26042 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro593_g172221.1 No alias Hypothetical protein 0.05 OrthoFinder
Sro649_g181170.1 Contig1362.g12543 Leucine rich repeat 0.04 OrthoFinder
Sro924_g220831.1 No alias Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 713 772
No external refs found!