Aliases : Contig446.g6009
Description : THO complex subunit 2
Gene families : OG_01_0002802 (OrthoFinder) Phylogenetic Tree(s): OG0002802_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sro19_g013450.1 | |
Cluster | HCCA: Cluster_257 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre12.g507700 | 30791679 | RNA processing.messenger ribonucleoprotein particle... | 0.03 | OrthoFinder | |
Cz09g28220.t1 | No alias | THO complex, subunitTHOC2, C-terminal; THO complex... | 0.03 | OrthoFinder | |
Dusal.0033s00006.1 | 33202506 | THO complex, subunitTHOC2, C-terminal; THO complex... | 0.02 | OrthoFinder | |
EOD20992 | No alias | THO complex, subunitTHOC2, N-terminal; THO complex,... | 0.04 | OrthoFinder | |
PTI_04G05000.1 | No alias | THO complex subunit 2, N-terminal domain; THO complex,... | 0.07 | OrthoFinder | |
TP06G06680.1 | No alias | THO complex, subunitTHOC2, C-terminal; THO complex... | 0.03 | OrthoFinder | |
Vocar.0008s0450.1 | 32897257 | THO complex, subunitTHOC2, N-terminal; THO complex,... | 0.02 | OrthoFinder | |
XM_002504522.1 | MICPUN_107427, 107427 | Hypothetical protein (THO2) | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Enrichment |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Enrichment |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Enrichment |
BP | GO:0002097 | tRNA wobble base modification | IEP | Enrichment |
BP | GO:0002098 | tRNA wobble uridine modification | IEP | Enrichment |
MF | GO:0003674 | molecular_function | IEP | Enrichment |
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003677 | DNA binding | IEP | Enrichment |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Enrichment |
MF | GO:0004843 | thiol-dependent deubiquitinase | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
MF | GO:0005515 | protein binding | IEP | Enrichment |
MF | GO:0005543 | phospholipid binding | IEP | Enrichment |
CC | GO:0005634 | nucleus | IEP | Enrichment |
CC | GO:0005667 | transcription regulator complex | IEP | Enrichment |
CC | GO:0005669 | transcription factor TFIID complex | IEP | Enrichment |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
BP | GO:0006265 | DNA topological change | IEP | Enrichment |
BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Enrichment |
BP | GO:0006396 | RNA processing | IEP | Enrichment |
BP | GO:0006397 | mRNA processing | IEP | Enrichment |
BP | GO:0006400 | tRNA modification | IEP | Enrichment |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | Enrichment |
BP | GO:0008150 | biological_process | IEP | Enrichment |
BP | GO:0008152 | metabolic process | IEP | Enrichment |
MF | GO:0008242 | omega peptidase activity | IEP | Enrichment |
MF | GO:0008270 | zinc ion binding | IEP | Enrichment |
MF | GO:0008289 | lipid binding | IEP | Enrichment |
BP | GO:0008380 | RNA splicing | IEP | Enrichment |
BP | GO:0009987 | cellular process | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
BP | GO:0016071 | mRNA metabolic process | IEP | Enrichment |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Enrichment |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
MF | GO:0017069 | snRNA binding | IEP | Enrichment |
MF | GO:0017070 | U6 snRNA binding | IEP | Enrichment |
MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Enrichment |
BP | GO:0019915 | lipid storage | IEP | Enrichment |
CC | GO:0030117 | membrane coat | IEP | Enrichment |
CC | GO:0030120 | vesicle coat | IEP | Enrichment |
CC | GO:0030127 | COPII vesicle coat | IEP | Enrichment |
MF | GO:0030623 | U5 snRNA binding | IEP | Enrichment |
BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
CC | GO:0033588 | elongator holoenzyme complex | IEP | Enrichment |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Enrichment |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
MF | GO:0035091 | phosphatidylinositol binding | IEP | Enrichment |
BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
CC | GO:0043226 | organelle | IEP | Enrichment |
CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
BP | GO:0043412 | macromolecule modification | IEP | Enrichment |
MF | GO:0043531 | ADP binding | IEP | Enrichment |
BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
BP | GO:0048193 | Golgi vesicle transport | IEP | Enrichment |
BP | GO:0051235 | maintenance of location | IEP | Enrichment |
BP | GO:0071103 | DNA conformation change | IEP | Enrichment |
BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:0097747 | RNA polymerase activity | IEP | Enrichment |
MF | GO:0101005 | deubiquitinase activity | IEP | Enrichment |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
No external refs found! |