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  5. Sro1993_g309880.1

Sro1993_g309880.1 (Contig1033.g10267)


Aliases : Contig1033.g10267

Description : Vesicle transport protein GOT1B


Gene families : OG_01_0003069 (OrthoFinder) Phylogenetic Tree(s): OG0003069_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1993_g309880.1
Cluster HCCA: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001095.24 tig00001095_g7041.t1 Vesicle transport protein GOT1 OS=Arabidopsis thaliana 0.01 OrthoFinder
PTI_13G03440.1 No alias Vesicle transport protein, Got1/SFT2-like [Interproscan]. 0.02 OrthoFinder
TP06G01940.1 No alias Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
MF GO:0005375 copper ion transmembrane transporter activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006825 copper ion transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0035434 copper ion transmembrane transport IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Enrichment
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Enrichment
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR007305 Vesicle_transpt_Got1/SFT2 14 110
No external refs found!