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  5. Sro1989_g309700.1

Sro1989_g309700.1 (Contig4094.g31277)


Aliases : Contig4094.g31277

Description : D-alanine--D-alanyl carrier protein ligase


Gene families : OG_01_0000117 (OrthoFinder) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1989_g309700.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Sro1326_g263040.1 Contig231.g2779 Hypothetical protein 0.03 OrthoFinder
Sro1945_g306990.1 Contig3128.g24832 Hypothetical protein 0.09 OrthoFinder
Sro225_g091720.1 Contig1661.g14970 D-alanine--D-alanyl carrier protein ligase 0.04 OrthoFinder
Sro3186_g344880.1 Contig1814.g15987 MSMEG_5435/MSMEI_5285 0.05 OrthoFinder
Sro571_g168700.1 Contig3541.g27383 D-alanine--D-alanyl carrier protein ligase 0.03 OrthoFinder
Sro613_g175580.1 No alias D-alanine--D-alanyl carrier protein ligase 0.05 OrthoFinder
Sro723_g192990.1 Contig2673.g21643 D-alanine--D-alanyl carrier protein ligase 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 12 434
No external refs found!