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  5. Sro196_g083650.1

Sro196_g083650.1 (Contig3206.g25361)


Aliases : Contig3206.g25361

Description : Proteasome regulatory subunit 7


Gene families : OG_01_0003144 (OrthoFinder) Phylogenetic Tree(s): OG0003144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro196_g083650.1
Cluster HCCA: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021464.16 tig00021464_g21722.t1 Protein degradation.26S proteasome.regulatory... 0.06 OrthoFinder
Cre14.g625400 30776673, RPT1 Protein degradation.26S proteasome.regulatory... 0.31 OrthoFinder
Cz07g22040.t1 No alias AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core... 0.11 OrthoFinder
Dusal.0663s00008.1 33186083 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.05 OrthoFinder
EOD04825 No alias AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core... 0.14 OrthoFinder
OT_01G04990.1 No alias ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.12 OrthoFinder
PTI_11G02160.1 No alias ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.45 OrthoFinder
Transcript_contig_58823 58823 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.03 OrthoFinder
Vocar.0022s0115.1 32891868 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.08 OrthoFinder
XM_002507609.1 MICPUN_51697, 51697 AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core... 0.02 OrthoFinder
lcl|BLLF01003031.1_cds_GFH26126.1_20603 HaLaN_24224, GFH26126 Regulatory particle triple-A ATPase subunit 1 0.06 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56600.1_9471 PRW56600 26S protease regulatory subunit 7 0.06 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494535.1_3065 KAA8494535 26S protease regulatory subunit 7B 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000502 proteasome complex IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006405 RNA export from nucleus IEP Enrichment
BP GO:0006406 mRNA export from nucleus IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
CC GO:0008537 proteasome activator complex IEP Enrichment
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0042176 regulation of protein catabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0050657 nucleic acid transport IEP Enrichment
BP GO:0050658 RNA transport IEP Enrichment
BP GO:0051028 mRNA transport IEP Enrichment
BP GO:0051168 nuclear export IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051236 establishment of RNA localization IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0061630 ubiquitin protein ligase activity IEP Enrichment
MF GO:0061659 ubiquitin-like protein ligase activity IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 233 366
IPR041569 AAA_lid_3 389 432
No external refs found!