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  5. Sro194_g082960.1

Sro194_g082960.1 (Contig237.g2891)


Aliases : Contig237.g2891

Description : Subunit alpha


Gene families : OG_01_0002996 (OrthoFinder) Phylogenetic Tree(s): OG0002996_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro194_g082960.1
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000254.114 tig00000254_g22571.t1 Cellular respiration.tricarboxylic acid... 0.02 OrthoFinder
Cre03.g193850 30787137, SCL1 Cellular respiration.tricarboxylic acid... 0.07 OrthoFinder
EOD04110 No alias Alpha subunit of succinate-CoA ligase [Ensembl]. 0.02 OrthoFinder
EOD37611 No alias Alpha subunit of succinate-CoA ligase [Ensembl]. 0.04 OrthoFinder
PTI_09G03400.1 No alias CoA-binding; ATP-citrate lyase/succinyl-CoA ligase... 0.02 OrthoFinder
TP04G06520.1 No alias CoA-binding; ATP-citrate lyase/succinyl-CoA ligase... 0.02 OrthoFinder
lcl|BLLF01001695.1_cds_GFH20776.1_15253 HaLaN_17954, GFH20776 Succinyl-CoA synthetase subunit alpha 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59308.1_7550 PRW59308 Succinyl-ligase alpha subunit 0.04 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494633.1_3163 KAA8494633 Succinate--CoA ligase ADP-forming subunit alpha-1, mitochondrial 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
CC GO:0008290 F-actin capping protein complex IEP Enrichment
BP GO:0010639 negative regulation of organelle organization IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0030832 regulation of actin filament length IEP Enrichment
BP GO:0030833 regulation of actin filament polymerization IEP Enrichment
BP GO:0030834 regulation of actin filament depolymerization IEP Enrichment
BP GO:0030835 negative regulation of actin filament depolymerization IEP Enrichment
BP GO:0030837 negative regulation of actin filament polymerization IEP Enrichment
BP GO:0031333 negative regulation of protein-containing complex assembly IEP Enrichment
BP GO:0032271 regulation of protein polymerization IEP Enrichment
BP GO:0032272 negative regulation of protein polymerization IEP Enrichment
BP GO:0032535 regulation of cellular component size IEP Enrichment
BP GO:0032956 regulation of actin cytoskeleton organization IEP Enrichment
BP GO:0032970 regulation of actin filament-based process IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043242 negative regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0043244 regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0043254 regulation of protein-containing complex assembly IEP Enrichment
BP GO:0044087 regulation of cellular component biogenesis IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0051016 barbed-end actin filament capping IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051129 negative regulation of cellular component organization IEP Enrichment
BP GO:0051493 regulation of cytoskeleton organization IEP Enrichment
BP GO:0051494 negative regulation of cytoskeleton organization IEP Enrichment
BP GO:0051693 actin filament capping IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0090066 regulation of anatomical structure size IEP Enrichment
BP GO:0110053 regulation of actin filament organization IEP Enrichment
BP GO:1901879 regulation of protein depolymerization IEP Enrichment
BP GO:1901880 negative regulation of protein depolymerization IEP Enrichment
BP GO:1902903 regulation of supramolecular fiber organization IEP Enrichment
BP GO:1902904 negative regulation of supramolecular fiber organization IEP Enrichment
InterPro domains Description Start Stop
IPR005811 CoA_ligase 179 300
IPR003781 CoA-bd 33 126
No external refs found!