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  5. Sro1948_g307240.1

Sro1948_g307240.1 (Contig1161.g11083)


Aliases : Contig1161.g11083

Description : PAP_fibrillin


Gene families : OG_01_0002515 (OrthoFinder) Phylogenetic Tree(s): OG0002515_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1948_g307240.1
Cluster HCCA: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_56187 56187 Plastid lipid-associated protein/fibrillin conserved... 0.02 OrthoFinder
lcl|BLLF01002582.1_cds_GFH24607.1_19084 HaLaN_22431, GFH24607 PAP_fibrillin domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004650 polygalacturonase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 192 294
No external refs found!