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  5. Sro1945_g306950.1

Sro1945_g306950.1 (Contig3128.g24828)


Aliases : Contig3128.g24828

Description : Putative fatty-acid--CoA ligase FadD21


Gene families : OG_01_0000117 (OrthoFinder) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1945_g306950.1
Cluster HCCA: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
Sro1066_g237320.1 Contig1437.g13208 D-alanine--D-alanyl carrier protein ligase 0.03 OrthoFinder
Sro11_g008450.1 Contig724.g8319 D-alanine--D-alanyl carrier protein ligase 0.03 OrthoFinder
Sro122_g059330.1 Contig71.g752 D-alanine--D-alanyl carrier protein ligase 0.03 OrthoFinder
Sro1903_g304510.1 Contig4361.g32858 D-alanine--D-alanyl carrier protein ligase 0.03 OrthoFinder
Sro193_g082580.1 Contig826.g9157 D-alanine--D-alanyl carrier protein ligase 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 1 395
No external refs found!