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  5. Sro1942_g306740.1

Sro1942_g306740.1 (Contig2861.g22939)


Aliases : Contig2861.g22939

Description : Hypothetical protein


Gene families : OG_01_0000754 (OrthoFinder) Phylogenetic Tree(s): OG0000754_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1942_g306740.1
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Sro1262_g257090.1 Contig187.g2166 Hypothetical protein 0.05 OrthoFinder
Sro160_g072100.1 Contig2985.g23706 Hypothetical protein 0.08 OrthoFinder
Sro1697_g291900.1 Contig3875.g29819 Harbinger transposase-derived nuclease domain [Interproscan]. 0.09 OrthoFinder
Sro2085_g313830.1 Contig3037.g24219 Harbinger transposase-derived nuclease domain [Interproscan]. 0.09 OrthoFinder
Sro262_g102081.1 No alias Harbinger transposase-derived nuclease domain [Interproscan]. 0.05 OrthoFinder
Sro2988_g341730.1 Contig1825.g16064 Harbinger transposase-derived nuclease domain [Interproscan]. 0.02 OrthoFinder
Sro412_g137830.1 Contig2922.g23255 Hypothetical protein 0.06 OrthoFinder
Sro462_g148040.1 Contig196.g2283 Hypothetical protein 0.04 OrthoFinder
Sro471_g149640.1 Contig458.g6177 Hypothetical protein 0.06 OrthoFinder
Sro514_g158140.1 Contig3991.g30655 Hypothetical protein 0.05 OrthoFinder
Sro712_g191290.1 Contig2484.g20334 Harbinger transposase-derived nuclease domain [Interproscan]. 0.09 OrthoFinder
Sro76_g041480.1 Contig184.g2126 Hypothetical protein 0.08 OrthoFinder
Sro76_g041500.1 Contig184.g2128 Harbinger transposase-derived nuclease domain [Interproscan]. 0.09 OrthoFinder
Sro804_g204910.1 Contig3806.g29164 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment

No InterPro domains available for this sequence

No external refs found!