Sro191_g082070.1 (Contig2614.g21200)

Aliases : Contig2614.g21200

Description : Cis-trans isomerase

Gene families : OG_01_0000026 (OrthoFinder) Phylogenetic Tree(s): OG0000026_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro191_g082070.1
Cluster	HCCA: Cluster_180

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000459.94	tig00000459_g1158.t1	Protein modification.protein folding and quality...	0.01	OrthoFinder
Cpa\|evm.model.tig00020554.51	tig00020554_g10833.t1	Protein modification.protein folding and quality...	0.02	OrthoFinder
Cpa\|evm.model.tig00020693.8	tig00020693_g13013.t1	RNA processing.RNA splicing.spliceosome-associated...	0.02	OrthoFinder
Dusal.0290s00017.1	33198665	Cyclophilin-type peptidyl-prolyl cis-trans isomerase...	0.01	OrthoFinder
OT_10G01080.1	No alias	Cyclophilin-type peptidyl-prolyl cis-trans isomerase...	0.02	OrthoFinder
PTI_03G03240.1	No alias	Cyclophilin-type peptidyl-prolyl cis-trans isomerase...	0.01	OrthoFinder
XM_003064238.1	MicpuC2_30266, 30266	Cyclophilin-type peptidyl-prolyl cis-trans isomerase...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016859	cis-trans isomerase activity	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018208	peptidyl-proline modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Enrichment
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Enrichment
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Enrichment
CC	GO:0005681	spliceosomal complex	IEP	Enrichment
BP	GO:0006396	RNA processing	IEP	Enrichment
BP	GO:0006397	mRNA processing	IEP	Enrichment
BP	GO:0007034	vacuolar transport	IEP	Enrichment
BP	GO:0008380	RNA splicing	IEP	Enrichment
BP	GO:0016071	mRNA metabolic process	IEP	Enrichment
MF	GO:0016670	oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor	IEP	Enrichment
MF	GO:0016972	thiol oxidase activity	IEP	Enrichment
CC	GO:0140513	nuclear protein-containing complex	IEP	Enrichment
CC	GO:1990904	ribonucleoprotein complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR013260	mRNA_splic_SYF2	256	401
IPR002130	Cyclophilin-type_PPIase_dom	12	164

External Links

No external refs found!