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  5. Sro1915_g305120.1

Sro1915_g305120.1 (Contig3943.g30228)


Aliases : Contig3943.g30228

Description : Ankyrin repeat protein


Gene families : OG_01_0000053 (OrthoFinder) Phylogenetic Tree(s): OG0000053_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1915_g305120.1
Cluster HCCA: Cluster_335

Target Alias Description ECC score Gene Family Method Actions
Sro1365_g266550.1 Contig1439.g13236 Ankyrin repeat protein 0.04 OrthoFinder
Sro274_g105420.1 Contig1557.g14166 Ankyrin containing protein (ISS) 0.03 OrthoFinder
Sro279_g106680.1 Contig3140.g24907 Ankyrin repeat protein 0.04 OrthoFinder
Sro3763_g350880.1 Contig2382.g19553 Ankyrin repeat protein 0.05 OrthoFinder
Sro480_g151330.1 Contig2927.g23334 Ankyrin repeat protein 0.04 OrthoFinder
Sro815_g206420.1 Contig3639.g28090 Ankyrin containing protein (ISS) 0.03 OrthoFinder
Sro8_g006880.1 Contig89.g1001 Ankyrin repeat protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!