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  5. Sro1911_g304940.1

Sro1911_g304940.1 (Contig1415.g12988)


Aliases : Contig1415.g12988

Description : Malate dehydrogenase (Fragment)


Gene families : OG_01_0000855 (OrthoFinder) Phylogenetic Tree(s): OG0000855_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Sro1911_g304940.1
Cluster HCCA: Cluster_297

Target Alias Description ECC score Gene Family Method Actions
Cre03.g194850 30788115, MDH1 Malate dehydrogenase, chloroplastic OS=Arabidopsis thaliana 0.05 OrthoFinder
Cz01g16230.t1 No alias Lactate/malate dehydrogenase, N-terminal; Lactate/malate... 0.01 OrthoFinder
PTI_31G00470.1 No alias Lactate/malate dehydrogenase, N-terminal; Lactate/malate... 0.03 OrthoFinder
Transcript_contig_54081 54081 Lactate/malate dehydrogenase, N-terminal; Lactate/malate... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001236 Lactate/malate_DH_N 31 182
IPR022383 Lactate/malate_DH_C 184 347
No external refs found!