Sro190_g081800.1 (Contig3488.g27055)

Aliases : Contig3488.g27055

Description : Importin subunit alpha

Gene families : OG_01_0000949 (OrthoFinder) Phylogenetic Tree(s): OG0000949_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro190_g081800.1
Cluster	HCCA: Cluster_180

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021721.27	tig00021721_g23229.t1	Protein translocation.nucleus.nucleocytoplasmic...	0.01	OrthoFinder
Cre04.g215850	30791448, IPA1	Protein translocation.nucleus.nucleocytoplasmic...	0.04	OrthoFinder
Cz12g23090.t1	No alias	Importin-alpha, importin-beta-binding domain; Armadillo;...	0.01	OrthoFinder
Dusal.0348s00002.1	33203503	Armadillo; Atypical Arm repeat; Importin-alpha,...	0.02	OrthoFinder
XM_003057234.1	MicpuC2_56270, 56270	Armadillo; Importin-alpha, importin-beta-binding domain;...	0.02	OrthoFinder
lcl\|BLLF01000307.1_cds_GFH10325.1_4802	HaLaN_05616, GFH10325	Importin subunit alpha	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006606	protein import into nucleus	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0017038	protein import	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0034504	protein localization to nucleus	None	Extended
BP	GO:0034613	cellular protein localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051170	import into nucleus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
MF	GO:0061608	nuclear import signal receptor activity	IEA	Interproscan
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
MF	GO:0140104	molecular carrier activity	None	Extended
MF	GO:0140142	nucleocytoplasmic carrier activity	None	Extended
MF	GO:0140597	protein carrier activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003684	damaged DNA binding	IEP	Enrichment
BP	GO:0006281	DNA repair	IEP	Enrichment
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Enrichment
BP	GO:0016192	vesicle-mediated transport	IEP	Enrichment
CC	GO:0030117	membrane coat	IEP	Enrichment
CC	GO:0030119	AP-type membrane coat adaptor complex	IEP	Enrichment
CC	GO:0030131	clathrin adaptor complex	IEP	Enrichment
CC	GO:0032991	protein-containing complex	IEP	Enrichment
BP	GO:0033554	cellular response to stress	IEP	Enrichment
BP	GO:0051716	cellular response to stimulus	IEP	Enrichment
CC	GO:0098796	membrane protein complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR032413	Arm_3	483	533
IPR002652	Importin-a_IBB	11	124
IPR000225	Armadillo	387	426
IPR000225	Armadillo	178	216
IPR000225	Armadillo	135	175
IPR000225	Armadillo	304	342
IPR000225	Armadillo	430	468
IPR000225	Armadillo	273	301
IPR000225	Armadillo	219	260
IPR000225	Armadillo	345	385

External Links

No external refs found!

Sro190_g081800.1 (Contig3488.g27055)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation