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  5. Sro1908_g304740.1

Sro1908_g304740.1 (Contig1938.g16674)


Aliases : Contig1938.g16674

Description : Kinetochore-Ndc80 subunit Spc24 [Interproscan].


Gene families : OG_01_0003484 (OrthoFinder) Phylogenetic Tree(s): OG0003484_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1908_g304740.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020961.73 tig00020961_g16694.t1 No description available 0.05 OrthoFinder
Cre12.g519850 30793077 No description available 0.07 OrthoFinder
Dusal.0015s00018.1 33190945 Hypothetical protein 0.03 OrthoFinder
EOD13523 No alias Hypothetical protein [Ensembl]. 0.02 OrthoFinder
EOD21908 No alias Hypothetical protein [Ensembl]. 0.02 OrthoFinder
PTI_14G03300.1 No alias Hypothetical protein 0.1 OrthoFinder
TP04G02560.1 No alias Hypothetical protein 0.08 OrthoFinder
Transcript_contig_58083 58083 Kinetochore-Ndc80 subunit Spc24 [Interproscan]. 0.02 OrthoFinder
Vocar.0037s0138.1 32897505 Hypothetical protein 0.03 OrthoFinder
XM_003064273.1 MicpuC2_54210, 54210 Kinetochore-Ndc80 subunit Spc24 [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01001762.1_cds_GFH21101.1_15578 HaLaN_18340, GFH21101 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000278 mitotic cell cycle IEP Enrichment
CC GO:0000775 chromosome, centromeric region IEP Enrichment
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007049 cell cycle IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016125 sterol metabolic process IEP Enrichment
BP GO:0016126 sterol biosynthetic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019207 kinase regulator activity IEP Enrichment
MF GO:0019887 protein kinase regulator activity IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0043085 positive regulation of catalytic activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
BP GO:0044093 positive regulation of molecular function IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0050790 regulation of catalytic activity IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0065009 regulation of molecular function IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0098687 chromosomal region IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR013252 Ndc80_Spc24 126 241
No external refs found!