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  5. Sro1903_g304520.1

Sro1903_g304520.1 (Contig4361.g32859)


Aliases : Contig4361.g32859

Description : Putative amino-acid ABC transporter-binding protein YhdW


Gene families : OG_01_0000402 (OrthoFinder) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Sro1903_g304520.1
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
Sro1067_g237390.1 Contig2309.g19054 Putative amino-acid ABC transporter-binding protein YhdW 0.03 OrthoFinder
Sro1084_g239490.1 Contig3162.g25056 Extracellular solute-binding protein 0.05 OrthoFinder
Sro1168_g248490.1 Contig1520.g13871 Extracellular solute-binding protein 0.05 OrthoFinder
Sro1292_g259960.1 Contig3668.g28337 Extracellular solute-binding protein 0.02 OrthoFinder
Sro1920_g305520.1 Contig2527.g20644 Extracellular solute-binding protein 0.02 OrthoFinder
Sro2307_g322760.1 Contig1768.g15637 Putative amino-acid ABC transporter-binding protein YhdW 0.04 OrthoFinder
Sro2384_g325690.1 Contig2856.g22895 Extracellular solute-binding protein 0.02 OrthoFinder
Sro238_g095580.1 Contig99.g1204 Extracellular solute-binding protein 0.04 OrthoFinder
Sro282_g107620.1 Contig1420.g13105 Extracellular solute-binding protein 0.04 OrthoFinder
Sro28_g018550.1 Contig404.g5464 Extracellular solute-binding protein 0.05 OrthoFinder
Sro441_g143600.1 Contig470.g6374 Extracellular solute-binding protein 0.02 OrthoFinder
Sro441_g143660.1 Contig470.g6380 Extracellular solute-binding protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0030638 polyketide metabolic process IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!