Sro1900_g304250.1 (Contig3998.g30694)

Aliases : Contig3998.g30694

Description : Stress transcription factor B-2b

Gene families : OG_01_0000044 (OrthoFinder) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro1900_g304250.1
Cluster	HCCA: Cluster_150

Target	Alias	Description	ECC score	Gene Family Method
PTI_02G01270.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.02	OrthoFinder
PTI_08G03210.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.03	OrthoFinder
PTI_15G02560.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.02	OrthoFinder
PTI_18G00910.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.02	OrthoFinder
PTI_23G00640.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.02	OrthoFinder
PTI_23G00680.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.02	OrthoFinder
PTI_23G00690.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.04	OrthoFinder
Sro1068_g237480.1	Contig852.g9367	Stress transcription factor B-2b	0.05	OrthoFinder
Sro1238_g255240.1	Contig4178.g31871	Shock factor protein 4	0.03	OrthoFinder
Sro1409_g270210.1	Contig1095.g10602	Heat stress transcription factor	0.04	OrthoFinder
Sro168_g074930.1	Contig1642.g14824	Shock factor protein 4	0.04	OrthoFinder
Sro2226_g319820.1	Contig2376.g19525	Heat stress transcription factor	0.03	OrthoFinder
Sro237_g095240.1	Contig1864.g16295	Heat stress transcription factor	0.03	OrthoFinder
Sro450_g145560.1	Contig271.g3481	Heat stress transcription factor	0.04	OrthoFinder
Sro769_g199870.1	Contig2367.g19489	Shock factor protein	0.03	OrthoFinder
Sro889_g216580.1	Contig1913.g16523	Stress transcription factor A-3	0.05	OrthoFinder
Sro9_g007240.1	Contig4120.g31492	Shock factor protein	0.04	OrthoFinder
TP01G11580.1	No alias	Hypothetical protein	0.02	OrthoFinder
TP03G09360.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.02	OrthoFinder
TP04G07230.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.02	OrthoFinder
TP05G08480.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.03	OrthoFinder
TP08G03170.1	No alias	Heat shock factor (HSF)-type, DNA-binding [Interproscan].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Enrichment
MF	GO:0003950	NAD+ ADP-ribosyltransferase activity	IEP	Enrichment
BP	GO:0006066	alcohol metabolic process	IEP	Enrichment
BP	GO:0007165	signal transduction	IEP	Enrichment
BP	GO:0016311	dephosphorylation	IEP	Enrichment
BP	GO:0019751	polyol metabolic process	IEP	Enrichment
BP	GO:0035556	intracellular signal transduction	IEP	Enrichment
BP	GO:0043647	inositol phosphate metabolic process	IEP	Enrichment
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Enrichment
BP	GO:0044282	small molecule catabolic process	IEP	Enrichment
BP	GO:0046164	alcohol catabolic process	IEP	Enrichment
BP	GO:0046174	polyol catabolic process	IEP	Enrichment
BP	GO:0046838	phosphorylated carbohydrate dephosphorylation	IEP	Enrichment
BP	GO:0046855	inositol phosphate dephosphorylation	IEP	Enrichment
BP	GO:0071545	inositol phosphate catabolic process	IEP	Enrichment
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	Enrichment
BP	GO:1901616	organic hydroxy compound catabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	69	162

External Links

No external refs found!

Sro1900_g304250.1 (Contig3998.g30694)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation