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  5. Sro18_g013180.1

Sro18_g013180.1 (Contig1351.g12478)


Aliases : Contig1351.g12478

Description : Exocyst complex component Sec3, C-terminal [Interproscan].


Gene families : OG_01_0012398 (OrthoFinder) Phylogenetic Tree(s): OG0012398_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Sro18_g013180.1
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
PTI_04G02940.1 No alias WASH complex subunit 3; Exocyst complex component Sec3,... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEA Interproscan
BP GO:0006887 exocytosis IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006914 autophagy IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0015708 silicic acid import across plasma membrane IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0017069 snRNA binding IEP Enrichment
MF GO:0017070 U6 snRNA binding IEP Enrichment
BP GO:0019915 lipid storage IEP Enrichment
MF GO:0030623 U5 snRNA binding IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0043531 ADP binding IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
BP GO:0061919 process utilizing autophagic mechanism IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
BP GO:0098656 anion transmembrane transport IEP Enrichment
BP GO:0098657 import into cell IEP Enrichment
BP GO:0098661 inorganic anion transmembrane transport IEP Enrichment
BP GO:0098739 import across plasma membrane IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR019160 Sec3_C 794 1447
No external refs found!