Sro18_g013020.1 (Contig1351.g12462)

Aliases : Contig1351.g12462

Description : Methylenetetrahydrofolate reductase

Gene families : OG_01_0014657 (OrthoFinder) Phylogenetic Tree(s): OG0014657_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro18_g013020.1
Cluster	HCCA: Cluster_321

Target	Alias	Description	ECC score	Gene Family Method	Actions
XM_002506498.1	MICPUN_104346, 104346	Hypothetical protein	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004489	methylenetetrahydrofolate reductase (NAD(P)H) activity	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006555	methionine metabolic process	IEA	Interproscan
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009066	aspartate family amino acid metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	None	Extended
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	Enrichment
MF	GO:0004177	aminopeptidase activity	IEP	Enrichment
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Enrichment
MF	GO:0004650	polygalacturonase activity	IEP	Enrichment
CC	GO:0005737	cytoplasm	IEP	Enrichment
BP	GO:0005975	carbohydrate metabolic process	IEP	Enrichment
BP	GO:0006352	DNA-templated transcription, initiation	IEP	Enrichment
BP	GO:0006508	proteolysis	IEP	Enrichment
BP	GO:0006534	cysteine metabolic process	IEP	Enrichment
BP	GO:0006535	cysteine biosynthetic process from serine	IEP	Enrichment
BP	GO:0006563	L-serine metabolic process	IEP	Enrichment
BP	GO:0006766	vitamin metabolic process	IEP	Enrichment
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Enrichment
BP	GO:0008064	regulation of actin polymerization or depolymerization	IEP	Enrichment
MF	GO:0008173	RNA methyltransferase activity	IEP	Enrichment
MF	GO:0008233	peptidase activity	IEP	Enrichment
MF	GO:0008234	cysteine-type peptidase activity	IEP	Enrichment
CC	GO:0008290	F-actin capping protein complex	IEP	Enrichment
MF	GO:0008374	O-acyltransferase activity	IEP	Enrichment
MF	GO:0008649	rRNA methyltransferase activity	IEP	Enrichment
MF	GO:0009001	serine O-acetyltransferase activity	IEP	Enrichment
BP	GO:0009069	serine family amino acid metabolic process	IEP	Enrichment
BP	GO:0009070	serine family amino acid biosynthetic process	IEP	Enrichment
BP	GO:0009110	vitamin biosynthetic process	IEP	Enrichment
BP	GO:0009235	cobalamin metabolic process	IEP	Enrichment
BP	GO:0009236	cobalamin biosynthetic process	IEP	Enrichment
BP	GO:0010639	negative regulation of organelle organization	IEP	Enrichment
BP	GO:0016070	RNA metabolic process	IEP	Enrichment
MF	GO:0016409	palmitoyltransferase activity	IEP	Enrichment
MF	GO:0016412	serine O-acyltransferase activity	IEP	Enrichment
MF	GO:0016413	O-acetyltransferase activity	IEP	Enrichment
MF	GO:0016670	oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor	IEP	Enrichment
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	Enrichment
MF	GO:0016787	hydrolase activity	IEP	Enrichment
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Enrichment
MF	GO:0016852	sirohydrochlorin cobaltochelatase activity	IEP	Enrichment
MF	GO:0016972	thiol oxidase activity	IEP	Enrichment
BP	GO:0019344	cysteine biosynthetic process	IEP	Enrichment
BP	GO:0030832	regulation of actin filament length	IEP	Enrichment
BP	GO:0030833	regulation of actin filament polymerization	IEP	Enrichment
BP	GO:0030834	regulation of actin filament depolymerization	IEP	Enrichment
BP	GO:0030835	negative regulation of actin filament depolymerization	IEP	Enrichment
BP	GO:0030837	negative regulation of actin filament polymerization	IEP	Enrichment
BP	GO:0031333	negative regulation of protein-containing complex assembly	IEP	Enrichment
BP	GO:0032271	regulation of protein polymerization	IEP	Enrichment
BP	GO:0032272	negative regulation of protein polymerization	IEP	Enrichment
BP	GO:0032535	regulation of cellular component size	IEP	Enrichment
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	Enrichment
BP	GO:0032970	regulation of actin filament-based process	IEP	Enrichment
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Enrichment
BP	GO:0033043	regulation of organelle organization	IEP	Enrichment
MF	GO:0035596	methylthiotransferase activity	IEP	Enrichment
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Enrichment
BP	GO:0043242	negative regulation of protein-containing complex disassembly	IEP	Enrichment
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	Enrichment
BP	GO:0043254	regulation of protein-containing complex assembly	IEP	Enrichment
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Enrichment
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Enrichment
BP	GO:0044283	small molecule biosynthetic process	IEP	Enrichment
BP	GO:0048519	negative regulation of biological process	IEP	Enrichment
BP	GO:0048523	negative regulation of cellular process	IEP	Enrichment
MF	GO:0050497	alkylthioltransferase activity	IEP	Enrichment
BP	GO:0051016	barbed-end actin filament capping	IEP	Enrichment
BP	GO:0051128	regulation of cellular component organization	IEP	Enrichment
BP	GO:0051129	negative regulation of cellular component organization	IEP	Enrichment
BP	GO:0051493	regulation of cytoskeleton organization	IEP	Enrichment
BP	GO:0051494	negative regulation of cytoskeleton organization	IEP	Enrichment
MF	GO:0051536	iron-sulfur cluster binding	IEP	Enrichment
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Enrichment
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Enrichment
MF	GO:0051540	metal cluster binding	IEP	Enrichment
BP	GO:0051693	actin filament capping	IEP	Enrichment
BP	GO:0090066	regulation of anatomical structure size	IEP	Enrichment
BP	GO:0110053	regulation of actin filament organization	IEP	Enrichment
MF	GO:0140102	catalytic activity, acting on a rRNA	IEP	Enrichment
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Enrichment
BP	GO:1901879	regulation of protein depolymerization	IEP	Enrichment
BP	GO:1901880	negative regulation of protein depolymerization	IEP	Enrichment
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	Enrichment
BP	GO:1902904	negative regulation of supramolecular fiber organization	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003171	Mehydrof_redctse-like	166	260

External Links

No external refs found!

Sro18_g013020.1 (Contig1351.g12462)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation