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  5. Sro18_g012910.1

Sro18_g012910.1 (Contig1351.g12451)


Aliases : Contig1351.g12451

Description : Helicase


Gene families : OG_01_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro18_g012910.1
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
Dusal.0560s00008.1 33197838 Helicase-associated [Interproscan]. 0.01 OrthoFinder
Dusal.0950s00001.1 33199248 Helicase-associated [Interproscan]. 0.02 OrthoFinder
PTI_08G04480.1 No alias Helicase-associated [Interproscan]. 0.02 OrthoFinder
PTI_11G01850.1 No alias Helicase-associated [Interproscan]. 0.02 OrthoFinder
Sro1285_g259300.1 Contig851.g9358 Helicase 0.04 OrthoFinder
Sro8_g006850.1 Contig89.g998 Helicase 0.03 OrthoFinder
TP14G03190.1 No alias Helicase-associated [Interproscan]. 0.03 OrthoFinder
XM_002507884.1 MICPUN_60724, 60724 Helicase-associated [Interproscan]. 0.01 OrthoFinder
XM_003056758.1 MicpuC2_56237, 56237 Helicase-associated [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499871.1_8824 KAA8499871 Helicase-associated [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0004143 diacylglycerol kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR005114 Helicase_assoc 586 673
IPR005114 Helicase_assoc 784 849
IPR005114 Helicase_assoc 685 768
No external refs found!