1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro189_g081490.1

Sro189_g081490.1


Description : Protein DnaJ


Gene families : OG_01_0000003 (OrthoFinder) Phylogenetic Tree(s): OG0000003_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro189_g081490.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000692.26 tig00000692_g3221.t1 No description available 0.01 OrthoFinder
Cre07.g316050 30775379, CDJ2 Chaperone protein dnaJ A6, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre17.g713051 30782311 No description available 0.02 OrthoFinder
Cz14g09050.t1 No alias DnaJ domain [Interproscan]. 0.02 OrthoFinder
OT_05G04560.1 No alias DnaJ domain; Chaperone DnaJ, C-terminal [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold2891.3 2891.3 DnaJ domain [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold3060.6 3060.6 DnaJ domain [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold555.4 555.4 DnaJ domain [Interproscan]. 0.02 OrthoFinder
TP11G01370.1 No alias DnaJ domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_56380 56380 DnaJ domain [Interproscan]. 0.01 OrthoFinder
XM_002506676.1 MICPUN_89153, 89153 DnaJ domain [Interproscan]. 0.01 OrthoFinder
XM_003059362.1 MicpuC2_58613, 58613 DnaJ domain [Interproscan]. 0.02 OrthoFinder
XM_003061633.1 MicpuC2_28590, 28590 DnaJ domain; Chaperone DnaJ, C-terminal [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002500.1_cds_GFH24312.1_18789 HaLaN_22082, GFH24312 Molecular chaperone 0.01 OrthoFinder
lcl|LHPG02000019.1_cds_PRW32569.1_3910 PRW32569 Chaperone dnaJ 72 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0000213 tRNA-intron endonuclease activity IEP Enrichment
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004549 tRNA-specific ribonuclease activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006535 cysteine biosynthetic process from serine IEP Enrichment
BP GO:0006563 L-serine metabolic process IEP Enrichment
MF GO:0008198 ferrous iron binding IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0009001 serine O-acetyltransferase activity IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009070 serine family amino acid biosynthetic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0016412 serine O-acyltransferase activity IEP Enrichment
MF GO:0016413 O-acetyltransferase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0018580 nitronate monooxygenase activity IEP Enrichment
BP GO:0019344 cysteine biosynthetic process IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 126 186
IPR015399 DUF1977_DnaJ-like 330 423
No external refs found!