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  5. Sro187_g080920.1

Sro187_g080920.1 (Contig2990.g23765)


Aliases : Contig2990.g23765

Description : Myb-related protein A


Gene families : OG_01_0000018 (OrthoFinder) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro187_g080920.1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
Cre01.g034350 30789393 RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder
Cz14g00040.t1 No alias SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
Cz15g15180.t1 No alias SANT/Myb domain [Interproscan]. 0.01 OrthoFinder
EOD36865 No alias SANT/Myb domain [Interproscan]. 0.01 OrthoFinder
OT_18G02020.1 No alias SANT/Myb domain [Interproscan]. 0.01 OrthoFinder
PTI_06G00320.1 No alias Myb-like DNA-binding domain [Interproscan]. 0.02 OrthoFinder
TP03G03200.1 No alias SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_57499 57499 SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
Vocar.0001s1620.1 32884611 SANT/Myb domain [Interproscan]. 0.01 OrthoFinder
Vocar.0026s0128.1 32892479 SANT/Myb domain [Interproscan]. 0.01 OrthoFinder
XM_002506532.1 MICPUN_73784, 73784 SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
XM_003057461.1 MicpuC2_39026, 39026 Myb-like DNA-binding domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44975.1_1767 PRW44975 Transcription factor MYB44-like 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498292.1_7245 KAA8498292 Transcriptional activator Myb 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498362.1_7315 KAA8498362 Transcription factor WER 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment

No InterPro domains available for this sequence

No external refs found!