1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro1872_g302830.1

Sro1872_g302830.1 (Contig3496.g27136)


Aliases : Contig3496.g27136

Description : Ankyrin repeat protein


Gene families : OG_01_0000053 (OrthoFinder) Phylogenetic Tree(s): OG0000053_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1872_g302830.1

Target Alias Description ECC score Gene Family Method Actions
OT_13G00430.1 No alias Ankyrin repeat-containing domain [Interproscan]. 0.02 OrthoFinder
Sro1131_g244710.1 Contig1944.g16715 Hypothetical protein 0.03 OrthoFinder
Sro1365_g266550.1 Contig1439.g13236 Ankyrin repeat protein 0.05 OrthoFinder
Sro1819_g299650.1 Contig1484.g13564 Ankyrin repeat protein 0.03 OrthoFinder
Sro2277_g321700.1 Contig2279.g18893 Ankyrin repeat protein 0.05 OrthoFinder
Sro266_g103120.1 Contig1823.g16043 Ankyrin repeat protein 0.06 OrthoFinder
Sro274_g105420.1 Contig1557.g14166 Ankyrin containing protein (ISS) 0.06 OrthoFinder
Sro279_g106680.1 Contig3140.g24907 Ankyrin repeat protein 0.05 OrthoFinder
Sro302_g112240.1 Contig378.g5082 Ankyrin repeat protein 0.04 OrthoFinder
Sro352_g124220.1 Contig2645.g21398 Ankyrin repeat protein 0.03 OrthoFinder
Sro480_g151330.1 Contig2927.g23334 Ankyrin repeat protein 0.05 OrthoFinder
Sro520_g159110.1 Contig2679.g21667 Ankyrin repeat protein 0.03 OrthoFinder
Sro815_g206420.1 Contig3639.g28090 Ankyrin containing protein (ISS) 0.04 OrthoFinder
Sro86_g045710.1 Contig2999.g23849 Hypothetical protein 0.06 OrthoFinder
Sro8_g006880.1 Contig89.g1001 Ankyrin repeat protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003993 acid phosphatase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!