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  5. Sro186_g080590.1

Sro186_g080590.1 (Contig266.g3340)


Aliases : Contig266.g3340

Description : Leucine Rich Repeat


Gene families : OG_01_0000159 (OrthoFinder) Phylogenetic Tree(s): OG0000159_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Sro186_g080590.1
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
Sro1021_g232240.1 Contig686.g7986 Leucine Rich Repeat 0.04 OrthoFinder
Sro1104_g241810.1 Contig4546.g33967 Leucine Rich Repeat 0.04 OrthoFinder
Sro1113_g242600.1 Contig761.g8634 Hypothetical protein 0.03 OrthoFinder
Sro1113_g242620.1 Contig761.g8636 Leucine Rich Repeat 0.03 OrthoFinder
Sro1113_g242630.1 Contig761.g8637 Leucine Rich Repeat 0.06 OrthoFinder
Sro1369_g266960.1 Contig3578.g27667 Receptor-like protein 0.03 OrthoFinder
Sro1545_g281350.1 Contig3310.g25937 Leucine Rich Repeat 0.05 OrthoFinder
Sro1715_g293070.1 Contig3682.g28417 Leucine Rich Repeat 0.08 OrthoFinder
Sro1817_g299560.1 Contig1204.g11343 Leucine Rich Repeat 0.03 OrthoFinder
Sro1928_g306040.1 Contig2945.g23386 Leucine Rich Repeat 0.04 OrthoFinder
Sro195_g083160.1 Contig4576.g34153 Leucine Rich Repeat 0.03 OrthoFinder
Sro195_g083180.1 Contig4576.g34155 Leucine Rich Repeat 0.01 OrthoFinder
Sro199_g084530.1 Contig257.g3191 Leucine Rich Repeat 0.03 OrthoFinder
Sro2120_g315390.1 Contig3476.g26953 Leucine Rich Repeat 0.03 OrthoFinder
Sro2120_g315410.1 Contig3476.g26955 Leucine Rich Repeat 0.04 OrthoFinder
Sro435_g142380.1 Contig492.g6644 Leucine Rich Repeat 0.02 OrthoFinder
Sro496_g154670.1 Contig3388.g26497 Leucine Rich Repeat 0.05 OrthoFinder
Sro614_g175770.1 Contig1589.g14431 Leucine Rich Repeat 0.06 OrthoFinder
Sro647_g180970.1 Contig3562.g27513 Leucine Rich Repeat 0.03 OrthoFinder
Sro820_g207300.1 Contig34.g212 Leucine rich repeat N-terminal domain 0.06 OrthoFinder
Sro840_g209430.1 Contig1129.g10841 Leucine Rich Repeat 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment

No InterPro domains available for this sequence

No external refs found!