1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro185_g080360.1

Sro185_g080360.1 (Contig1228.g11511)


Aliases : Contig1228.g11511

Description : Protein of unknown function (DUF1336)


Gene families : OG_01_0000250 (OrthoFinder) Phylogenetic Tree(s): OG0000250_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro185_g080360.1
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
TP03G05930.1 No alias Protein ENHANCED DISEASE RESISTANCE 2, C-terminal [Interproscan]. 0.02 OrthoFinder
Transcript_contig_54228 54228 START domain; Protein ENHANCED DISEASE RESISTANCE 2,... 0.01 OrthoFinder
Vocar.0001s0325.1 32884733 Protein ENHANCED DISEASE RESISTANCE 2, C-terminal [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002889.1_cds_GFH25686.1_20163 HaLaN_23690, GFH25686 DUF1336 domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
BP GO:0030638 polyketide metabolic process IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
InterPro domains Description Start Stop
IPR009769 EDR2_C 184 409
No external refs found!