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  5. Sro1843_g301140.1

Sro1843_g301140.1 (Contig4701.g34962)


Aliases : Contig4701.g34962

Description : XPC-binding domain


Gene families : OG_01_0001949 (OrthoFinder) Phylogenetic Tree(s): OG0001949_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1843_g301140.1
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Cre08.g366400 30773546 Ubiquitin receptor RAD23b OS=Arabidopsis thaliana 0.03 OrthoFinder
PTI_02G03870.1 No alias Ubiquitin-like domain; Ubiquitin-associated domain;... 0.06 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493577.1_4339 KAA8493577 Ubiquitin receptor RAD23b 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0005200 structural constituent of cytoskeleton IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
InterPro domains Description Start Stop
IPR015940 UBA 89 122
No external refs found!