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  5. Sro183_g079580.1

Sro183_g079580.1 (Contig3056.g24303)


Aliases : Contig3056.g24303

Description : Cullin-9


Gene families : OG_01_0001542 (OrthoFinder) Phylogenetic Tree(s): OG0001542_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro183_g079580.1
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001006.5 tig00001006_g6224.t1 ATP-dependent RNA helicase DEAH12, chloroplastic... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0009314 response to radiation IEP Enrichment
BP GO:0009416 response to light stimulus IEP Enrichment
BP GO:0009581 detection of external stimulus IEP Enrichment
BP GO:0009582 detection of abiotic stimulus IEP Enrichment
BP GO:0009583 detection of light stimulus IEP Enrichment
BP GO:0009584 detection of visible light IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009628 response to abiotic stimulus IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
BP GO:0018298 protein-chromophore linkage IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0051606 detection of stimulus IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR001660 SAM 9 73
IPR002867 IBR_dom 447 496
IPR002867 IBR_dom 380 430
No external refs found!