Sro1811_g299210.1 (Contig3692.g28473)


Aliases : Contig3692.g28473

Description : Shock factor protein


Gene families : OG_01_0000044 (OrthoFinder) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1811_g299210.1
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Sro248_g098370.1 Contig288.g3771 Heat stress transcription factor 0.03 OrthoFinder
Sro482_g151900.1 Contig232.g2800 Transcription factor 0.01 OrthoFinder
Sro889_g216580.1 Contig1913.g16523 Stress transcription factor A-3 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005261 cation channel activity IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0016540 protein autoprocessing IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 86 176
No external refs found!