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  5. Sro17_g012300.1

Sro17_g012300.1 (Contig269.g3409)


Aliases : Contig269.g3409

Description : Choline transporter-like protein


Gene families : OG_01_0001533 (OrthoFinder) Phylogenetic Tree(s): OG0001533_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro17_g012300.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001542.16 tig00001542_g9324.t1 Choline transporter protein 1 OS=Arabidopsis thaliana 0.01 OrthoFinder
SymbC1.scaffold3282.3 3282.3 Calcineurin-like phosphoesterase domain, ApaH type;... 0.03 OrthoFinder
lcl|BLLF01002049.1_cds_GFH22482.1_16959 HaLaN_19956, GFH22482 Choline transporter-like [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR007603 Choline_transptr-like 325 647
No external refs found!