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  5. Sro1798_g298280.1

Sro1798_g298280.1 (Contig1745.g15542)


Aliases : Contig1745.g15542

Description : Helicase


Gene families : OG_01_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1798_g298280.1
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Sro1003_g230080.1 Contig3777.g29004 Helicase 0.03 OrthoFinder
Sro1927_g305950.1 Contig136.g1514 Helicase 0.02 OrthoFinder
Sro245_g097591.1 No alias Helicase-associated [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold12792.1 12792.1 Helicase-associated [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005261 cation channel activity IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0016540 protein autoprocessing IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
InterPro domains Description Start Stop
IPR005114 Helicase_assoc 178 236
IPR005114 Helicase_assoc 110 166
IPR005114 Helicase_assoc 387 449
IPR005114 Helicase_assoc 252 313
IPR005114 Helicase_assoc 321 380
No external refs found!