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  5. Sro1797_g298180.1

Sro1797_g298180.1 (Contig3752.g28735)


Aliases : Contig3752.g28735

Description : Snare region anchored in the vesicle membrane C-terminus [Interproscan].


Gene families : OG_01_0012372 (OrthoFinder) Phylogenetic Tree(s): OG0012372_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Sro1797_g298180.1
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
Sro3323_g346780.1 Contig1216.g11416 Snare region anchored in the vesicle membrane C-terminus... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!