1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro178_g078080.1

Sro178_g078080.1 (Contig275.g3533)


Aliases : Contig275.g3533

Description : Protease proteolytic subunit


Gene families : OG_01_0000040 (OrthoFinder) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro178_g078080.1
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001420.2 tig00001420_g8689.t1 Protein degradation.peptidase families.serine-type... 0.01 OrthoFinder
Cpa|evm.model.tig00020553.201 tig00020553_g10691.t1 ATP-dependent Clp protease proteolytic subunit 4,... 0.04 OrthoFinder
Cpa|evm.model.tig00020563.155 tig00020563_g11357.t1 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder
Cpa|evm.model.tig00020952.49 tig00020952_g16507.t1 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder
Cpa|evm.model.tig00021522.2 tig00021522_g22096.t1 ATP-dependent Clp protease proteolytic subunit 5,... 0.02 OrthoFinder
Cz12g19130.t1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
EOD14390 No alias Putative endopeptidase Clp [Ensembl]. 0.01 OrthoFinder
EOD16395 No alias Putative endopeptidase Clp [Ensembl]. 0.02 OrthoFinder
OT_09G02930.1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
PTI_03G00950.1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
PTI_04G01800.1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
PTI_15G00750.1 No alias Clp protease proteolytic subunit... 0.04 OrthoFinder
PTI_26G01270.1 No alias Clp protease proteolytic subunit... 0.04 OrthoFinder
TP01G08820.1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
TP14G01640.1 No alias Clp protease proteolytic subunit... 0.04 OrthoFinder
TP24G00340.1 No alias Clp protease proteolytic subunit... 0.05 OrthoFinder
Transcript_contig_56330 56330 Clp protease proteolytic subunit... 0.01 OrthoFinder
Vocar.0006s0234.1 32894393 Clp protease proteolytic subunit... 0.02 OrthoFinder
lcl|BLLF01000415.1_cds_GFH11567.1_6044 HaLaN_07086, GFH11567 ATP-dependent Clp protease proteolytic subunit 0.01 OrthoFinder
lcl|BLLF01006507.1_cds_GFH32317.1_26794 HaLaN_31518, GFH32317 ATP-dependent Clp protease proteolytic subunit 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498561.1_7514 KAA8498561 ATP-dependent Clp protease proteolytic subunit 2 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
CC GO:0005787 signal peptidase complex IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006465 signal peptide processing IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 74 249
No external refs found!