1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro1772_g296700.1

Sro1772_g296700.1 (Contig4653.g34637)


Aliases : Contig4653.g34637

Description : Leucine Rich Repeat


Gene families : OG_01_0000352 (OrthoFinder) Phylogenetic Tree(s): OG0000352_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1772_g296700.1

Target Alias Description ECC score Gene Family Method Actions
Sro1025_g232730.1 Contig568.g7224 Hypothetical protein 0.03 OrthoFinder
Sro106_g053560.1 Contig1122.g10753 Receptor-like protein kinase 0.02 OrthoFinder
Sro126_g060410.1 Contig82.g858 Receptor-like protein kinase 0.03 OrthoFinder
Sro1312_g261850.1 Contig2711.g21814 Leucine Rich Repeat 0.04 OrthoFinder
Sro166_g074290.1 Contig1709.g15308 Leucine Rich Repeat 0.03 OrthoFinder
Sro172_g075960.1 Contig1453.g13305 Leucine Rich Repeat 0.04 OrthoFinder
Sro1991_g309810.1 Contig4515.g33858 LRR receptor-like serine threonine-protein kinase 0.01 OrthoFinder
Sro202_g085440.1 Contig1673.g15051 Leucine Rich Repeat 0.01 OrthoFinder
Sro202_g085450.1 Contig1673.g15052 Leucine Rich Repeat 0.01 OrthoFinder
Sro239_g095860.1 Contig3063.g24382 Leucine Rich Repeat 0.03 OrthoFinder
Sro308_g113540.1 Contig2352.g19324 Leucine rich repeat N-terminal domain 0.02 OrthoFinder
Sro308_g113630.1 Contig2352.g19333 LRR receptor-like serine threonine-protein kinase 0.01 OrthoFinder
Sro425_g140150.1 Contig3537.g27360 Leucine Rich Repeat 0.02 OrthoFinder
Sro45_g026850.1 Contig2311.g19067 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro45_g027150.1 Contig2311.g19097 Leucine Rich Repeat 0.01 OrthoFinder
Sro471_g149610.1 Contig458.g6174 Receptor-like protein kinase 0.01 OrthoFinder
Sro519_g158940.1 Contig1321.g12211 Leucine Rich Repeat 0.02 OrthoFinder
Sro5_g004180.1 Contig4001.g30733 Leucine Rich Repeat 0.07 OrthoFinder
Sro801_g204390.1 Contig2787.g22404 STYKc 0.08 OrthoFinder
Sro99_g050850.1 Contig1378.g12656 Leucine rich repeat N-terminal domain 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment

No InterPro domains available for this sequence

No external refs found!