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  5. Sro1765_g296200.1

Sro1765_g296200.1 (Contig1144.g10955)


Aliases : Contig1144.g10955

Description : Leucine Rich Repeat


Gene families : OG_01_0000335 (OrthoFinder) Phylogenetic Tree(s): OG0000335_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1765_g296200.1
Cluster HCCA: Cluster_317

Target Alias Description ECC score Gene Family Method Actions
Sro1011_g231120.1 Contig997.g10085 LRR receptor-like serine threonine-protein kinase 0.06 OrthoFinder
Sro118_g057810.1 Contig2714.g21851 LRR receptor-like serine threonine-protein kinase 0.06 OrthoFinder
Sro1475_g275830.1 Contig4476.g33631 LRR receptor-like serine threonine-protein kinase At4g08850-like 0.03 OrthoFinder
Sro1475_g275840.1 Contig4476.g33632 Leucine rich repeat 0.04 OrthoFinder
Sro1626_g286890.1 Contig1454.g13330 Leucine Rich Repeat 0.05 OrthoFinder
Sro1637_g287620.1 Contig4007.g30810 STYKc 0.04 OrthoFinder
Sro1716_g293210.1 Contig2566.g20846 Leucine Rich Repeat 0.02 OrthoFinder
Sro1798_g298240.1 Contig1745.g15538 Leucine Rich Repeat 0.03 OrthoFinder
Sro213_g088550.1 Contig1149.g10995 Leucine Rich Repeat 0.04 OrthoFinder
Sro2299_g322480.1 Contig2651.g21423 STYKc 0.05 OrthoFinder
Sro2324_g323350.1 Contig1786.g15807 Leucine rich repeat 0.03 OrthoFinder
Sro249_g098560.1 Contig4691.g34860 Hypothetical protein 0.03 OrthoFinder
Sro266_g103160.1 Contig1823.g16047 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro3299_g346370.1 Contig3585.g27692 LRR receptor-like serine threonine-protein kinase 0.04 OrthoFinder
Sro33_g021400.1 Contig2613.g21161 Receptor-like protein kinase 0.04 OrthoFinder
Sro349_g123440.1 Contig1280.g11960 Leucine Rich Repeat 0.03 OrthoFinder
Sro3525_g348920.1 Contig1800.g15879 Hypothetical protein 0.02 OrthoFinder
Sro493_g154100.1 Contig1170.g11142 Leucine Rich Repeat 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0009452 7-methylguanosine RNA capping IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0030014 CCR4-NOT complex IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
CC GO:0031464 Cul4A-RING E3 ubiquitin ligase complex IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0036260 RNA capping IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!