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  5. Sro175_g077010.1

Sro175_g077010.1 (Contig1856.g16217)


Aliases : Contig1856.g16217

Description : Harbinger transposase-derived nuclease domain [Interproscan].


Gene families : OG_01_0000657 (OrthoFinder) Phylogenetic Tree(s): OG0000657_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro175_g077010.1
Cluster HCCA: Cluster_389

Target Alias Description ECC score Gene Family Method Actions
Sro1031_g233500.1 Contig1465.g13459 Hypothetical protein 0.03 OrthoFinder
Sro2296_g322390.1 Contig1462.g13430 Hypothetical protein 0.02 OrthoFinder
Sro35_g022370.1 Contig3323.g26114 Hypothetical protein 0.05 OrthoFinder
Sro905_g218450.1 Contig2792.g22457 Harbinger transposase-derived nuclease domain [Interproscan]. 0.08 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 46 188
No external refs found!