- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Contig2256.g18674
Description : And recombination protein RadA
Gene families : OG_01_0000338 (OrthoFinder) Phylogenetic Tree(s): OG0000338_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro1748_g295150.1 | |
| Cluster | HCCA: Cluster_44 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre06.g278151 | 30779436 | DNA repair protein XRCC3 homolog OS=Arabidopsis thaliana | 0.03 | OrthoFinder | |
| Cre14.g622850 | 30776108 | DNA damage response.BRCC DNA-damage response... | 0.02 | OrthoFinder | |
| EOD12221 | No alias | Rad51 DNA recombinase [Ensembl]. | 0.01 | OrthoFinder | |
| EOD18508 | No alias | Rad51 DNA recombinase [Ensembl]. | 0.02 | OrthoFinder | |
| OT_08G01790.1 | No alias | Helix-hairpin-helix domain; DNA recombination and repair... | 0.03 | OrthoFinder | |
| PTI_01G04170.1 | No alias | DNA recombination and repair protein Rad51-like,... | 0.02 | OrthoFinder | |
| PTI_09G02320.1 | No alias | DNA recombination and repair protein Rad51-like,... | 0.03 | OrthoFinder | |
| lcl|BLLF01000516.1_cds_GFH12561.1_7038 | HaLaN_08273, GFH12561 | RECA_2 domain-containing protein | 0.01 | OrthoFinder | |
| lcl|BLLF01000516.1_cds_GFH12562.1_7039 | HaLaN_08274, GFH12562 | Meiotic recombination DMC1 | 0.01 | OrthoFinder | |
| lcl|VRMN01000001.1_cds_KAA8499085.1_8038 | KAA8499085 | Meiotic recombination protein DMC1/LIM15-like | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| CC | GO:0000775 | chromosome, centromeric region | IEP | Enrichment |
| CC | GO:0000786 | nucleosome | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0003678 | DNA helicase activity | IEP | Enrichment |
| MF | GO:0003777 | microtubule motor activity | IEP | Enrichment |
| MF | GO:0004518 | nuclease activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| BP | GO:0006260 | DNA replication | IEP | Enrichment |
| BP | GO:0006928 | movement of cell or subcellular component | IEP | Enrichment |
| BP | GO:0007017 | microtubule-based process | IEP | Enrichment |
| BP | GO:0007018 | microtubule-based movement | IEP | Enrichment |
| BP | GO:0007059 | chromosome segregation | IEP | Enrichment |
| MF | GO:0008017 | microtubule binding | IEP | Enrichment |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Enrichment |
| MF | GO:0008270 | zinc ion binding | IEP | Enrichment |
| MF | GO:0015631 | tubulin binding | IEP | Enrichment |
| BP | GO:0016579 | protein deubiquitination | IEP | Enrichment |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| CC | GO:0018995 | host cellular component | IEP | Enrichment |
| BP | GO:0022402 | cell cycle process | IEP | Enrichment |
| BP | GO:0022414 | reproductive process | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| CC | GO:0032993 | protein-DNA complex | IEP | Enrichment |
| CC | GO:0033643 | host cell part | IEP | Enrichment |
| CC | GO:0033646 | host intracellular part | IEP | Enrichment |
| CC | GO:0033647 | host intracellular organelle | IEP | Enrichment |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| CC | GO:0042025 | host cell nucleus | IEP | Enrichment |
| MF | GO:0043138 | 3'-5' DNA helicase activity | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| CC | GO:0044815 | DNA packaging complex | IEP | Enrichment |
| BP | GO:0045132 | meiotic chromosome segregation | IEP | Enrichment |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| CC | GO:0098687 | chromosomal region | IEP | Enrichment |
| BP | GO:0098813 | nuclear chromosome segregation | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:1903046 | meiotic cell cycle process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013632 | DNA_recomb/repair_Rad51_C | 89 | 340 |
| No external refs found! |