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  5. Sro171_g075840.1

Sro171_g075840.1 (Contig113.g1293)


Aliases : Contig113.g1293

Description : Retrotransposon protein


Gene families : OG_01_0000121 (OrthoFinder) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro171_g075840.1
Cluster HCCA: Cluster_432

Target Alias Description ECC score Gene Family Method Actions
Sro2183_g318040.1 Contig2199.g18315 Hypothetical protein 0.04 OrthoFinder
Sro2603_g332380.1 Contig841.g9269 Retrotransposon protein 0.02 OrthoFinder
Sro2626_g332960.1 Contig2818.g22596 Retrotransposon protein 0.06 OrthoFinder
Sro2770_g336730.1 Contig4147.g31666 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006820 anion transport IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015109 chromate transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
BP GO:0015703 chromate transport IEP Enrichment

No InterPro domains available for this sequence

No external refs found!