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Aliases : Contig3856.g29685
Description : Zinc finger, MYND-type [Interproscan].
Gene families : OG_01_0003899 (OrthoFinder) Phylogenetic Tree(s): OG0003899_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro1718_g293370.1 | |
| Cluster | HCCA: Cluster_92 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sro2174_g317680.1 | Contig2241.g18603 | Zinc finger, MYND-type [Interproscan]. | 0.04 | OrthoFinder | |
| Sro411_g137550.1 | Contig243.g2961 | Zinc finger, MYND-type [Interproscan]. | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | Enrichment |
| CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | Enrichment |
| MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | Enrichment |
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0004827 | proline-tRNA ligase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| CC | GO:0005680 | anaphase-promoting complex | IEP | Enrichment |
| BP | GO:0006270 | DNA replication initiation | IEP | Enrichment |
| BP | GO:0006433 | prolyl-tRNA aminoacylation | IEP | Enrichment |
| BP | GO:0007346 | regulation of mitotic cell cycle | IEP | Enrichment |
| BP | GO:0010498 | proteasomal protein catabolic process | IEP | Enrichment |
| BP | GO:0010564 | regulation of cell cycle process | IEP | Enrichment |
| BP | GO:0010965 | regulation of mitotic sister chromatid separation | IEP | Enrichment |
| BP | GO:0030071 | regulation of mitotic metaphase/anaphase transition | IEP | Enrichment |
| BP | GO:0030163 | protein catabolic process | IEP | Enrichment |
| BP | GO:0031145 | anaphase-promoting complex-dependent catabolic process | IEP | Enrichment |
| CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | Enrichment |
| BP | GO:0033043 | regulation of organelle organization | IEP | Enrichment |
| BP | GO:0033044 | regulation of chromosome organization | IEP | Enrichment |
| BP | GO:0033045 | regulation of sister chromatid segregation | IEP | Enrichment |
| BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | Enrichment |
| BP | GO:0051128 | regulation of cellular component organization | IEP | Enrichment |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Enrichment |
| MF | GO:0051540 | metal cluster binding | IEP | Enrichment |
| BP | GO:0051726 | regulation of cell cycle | IEP | Enrichment |
| BP | GO:0051983 | regulation of chromosome segregation | IEP | Enrichment |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Enrichment |
| BP | GO:1901987 | regulation of cell cycle phase transition | IEP | Enrichment |
| BP | GO:1901990 | regulation of mitotic cell cycle phase transition | IEP | Enrichment |
| BP | GO:1902099 | regulation of metaphase/anaphase transition of cell cycle | IEP | Enrichment |
| BP | GO:1905818 | regulation of chromosome separation | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002893 | Znf_MYND | 222 | 260 |
| No external refs found! |