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  5. Sro1718_g293300.1

Sro1718_g293300.1 (Contig3856.g29678)


Aliases : Contig3856.g29678

Description : Hypothetical protein


Gene families : OG_01_0000121 (OrthoFinder) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1718_g293300.1
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
Sro1026_g232840.1 Contig4072.g31220 Hypothetical protein 0.05 OrthoFinder
Sro1340_g264400.1 Contig1391.g12822 Retrotransposon protein 0.04 OrthoFinder
Sro1587_g284220.1 Contig878.g9432 Retrotransposon protein 0.04 OrthoFinder
Sro1687_g291190.1 Contig3941.g30218 Retrotransposon protein 0.03 OrthoFinder
Sro1966_g308300.1 Contig1903.g16494 Hypothetical protein 0.03 OrthoFinder
Sro2070_g313370.1 Contig1182.g11240 Hypothetical protein 0.04 OrthoFinder
Sro2313_g322880.1 Contig2128.g17959 Retrotransposon protein 0.04 OrthoFinder
Sro2603_g332380.1 Contig841.g9269 Retrotransposon protein 0.02 OrthoFinder
Sro2710_g335230.1 Contig3750.g28727 Hypothetical protein 0.04 OrthoFinder
Sro2710_g335250.1 Contig3750.g28729 Hypothetical protein 0.04 OrthoFinder
Sro2776_g336840.1 Contig650.g7770 Hypothetical protein 0.04 OrthoFinder
Sro2815_g337740.1 Contig4348.g32793 Retrotransposon protein 0.04 OrthoFinder
Sro291_g109520.1 Contig4055.g31098 Hypothetical protein 0.04 OrthoFinder
Sro2951_g340920.1 Contig1934.g16653 Retrotransposon protein 0.05 OrthoFinder
Sro494_g154220.1 Contig3119.g24787 Hypothetical protein 0.03 OrthoFinder
Sro66_g037090.1 Contig399.g5379 Retrotransposon protein 0.03 OrthoFinder
Sro730_g193960.1 Contig80.g828 Hypothetical protein 0.03 OrthoFinder
Sro833_g208550.1 Contig120.g1361 Retrotransposon protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment

No InterPro domains available for this sequence

No external refs found!