1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro1715_g293050.1

Sro1715_g293050.1 (Contig3682.g28415)


Aliases : Contig3682.g28415

Description : Leucine Rich Repeat


Gene families : OG_01_0000159 (OrthoFinder) Phylogenetic Tree(s): OG0000159_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1715_g293050.1
Cluster HCCA: Cluster_276

Target Alias Description ECC score Gene Family Method Actions
Sro1753_g295440.1 Contig4414.g33157 Leucine Rich Repeat 0.01 OrthoFinder
Sro186_g080620.2 No alias Hypothetical protein 0.02 OrthoFinder
Sro320_g116600.1 Contig3665.g28321 Leucine Rich Repeat 0.02 OrthoFinder
Sro351_g124010.1 Contig4381.g32955 Leucine Rich Repeat 0.03 OrthoFinder
Sro998_g229490.1 Contig4084.g31256 Leucine Rich Repeat 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 432 454
No external refs found!