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  5. Sro1705_g292410.1

Sro1705_g292410.1 (Contig4149.g31669)


Aliases : Contig4149.g31669

Description : PiggyBac transposable element-derived protein [Interproscan].


Gene families : OG_01_0002364 (OrthoFinder) Phylogenetic Tree(s): OG0002364_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1705_g292410.1
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
Sro1022_g232310.1 Contig2862.g22945 PiggyBac transposable element-derived protein [Interproscan]. 0.05 OrthoFinder
Sro1817_g299490.1 Contig1204.g11336 PiggyBac transposable element-derived protein [Interproscan]. 0.06 OrthoFinder
Sro2036_g312090.1 Contig118.g1341 Hypothetical protein 0.09 OrthoFinder
Sro33_g021190.1 Contig2613.g21140 PiggyBac transposable element-derived protein [Interproscan]. 0.03 OrthoFinder
Sro3459_g348250.1 Contig2360.g19375 PiggyBac transposable element-derived protein [Interproscan]. 0.05 OrthoFinder
Sro347_g122870.1 Contig477.g6455 PiggyBac transposable element-derived protein [Interproscan]. 0.09 OrthoFinder
Sro347_g122880.1 Contig477.g6456 PiggyBac transposable element-derived protein [Interproscan]. 0.08 OrthoFinder
Sro354_g124780.2 No alias PiggyBac transposable element-derived protein [Interproscan]. 0.03 OrthoFinder
Sro477_g150790.1 Contig553.g7058 PiggyBac transposable element-derived protein 0.07 OrthoFinder
Sro6_g005660.1 Contig175.g2071 Hypothetical protein 0.08 OrthoFinder
Sro832_g208500.1 Contig3251.g25666 Hypothetical protein 0.05 OrthoFinder
Sro832_g208510.1 Contig3251.g25667 PiggyBac transposable element-derived protein [Interproscan]. 0.04 OrthoFinder
Sro845_g209950.1 Contig2192.g18247 Hypothetical protein 0.07 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003724 RNA helicase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR029526 PGBD 362 759
No external refs found!