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  5. Sro16_g011820.1

Sro16_g011820.1 (Contig916.g9619)


Aliases : Contig916.g9619

Description : Putative white-brown complex homolog protein 30


Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Sro16_g011820.1
Cluster HCCA: Cluster_331

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020685.31 tig00020685_g12947.t1 ABC transporter G family member 22 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre02.g096000 30785390 Solute transport.primary active transport.ABC... 0.01 OrthoFinder
Cre12.g547300 30793076 Solute transport.primary active transport.ABC... 0.01 OrthoFinder
Cz03g22070.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
Cz12g02110.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold3153.5 3153.5 ABC-2 type transporter [Interproscan]. 0.02 OrthoFinder
Transcript_contig_53730 53730 ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder
Vocar.0005s0197.1 32883888 ABC transporter-like [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016840 carbon-nitrogen lyase activity IEP Enrichment
MF GO:0016843 amine-lyase activity IEP Enrichment
MF GO:0016844 strictosidine synthase activity IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 510 719
IPR003439 ABC_transporter-like_ATP-bd 214 362
No external refs found!