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  5. Sro1697_g291900.1

Sro1697_g291900.1 (Contig3875.g29819)


Aliases : Contig3875.g29819

Description : Harbinger transposase-derived nuclease domain [Interproscan].


Gene families : OG_01_0000754 (OrthoFinder) Phylogenetic Tree(s): OG0000754_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1697_g291900.1
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
Sro1259_g256891.1 No alias Harbinger transposase-derived nuclease domain [Interproscan]. 0.04 OrthoFinder
Sro1262_g257090.1 Contig187.g2166 Hypothetical protein 0.08 OrthoFinder
Sro1942_g306740.1 Contig2861.g22939 Hypothetical protein 0.09 OrthoFinder
Sro262_g102081.1 No alias Harbinger transposase-derived nuclease domain [Interproscan]. 0.05 OrthoFinder
Sro2659_g333930.1 Contig1681.g15098 Hypothetical protein 0.01 OrthoFinder
Sro292_g109750.1 Contig484.g6545 Harbinger transposase-derived nuclease domain [Interproscan]. 0.05 OrthoFinder
Sro3100_g343730.1 Contig1645.g14850 Hypothetical protein 0.12 OrthoFinder
Sro382_g131091.1 No alias Harbinger transposase-derived nuclease domain [Interproscan]. 0.03 OrthoFinder
Sro412_g137830.1 Contig2922.g23255 Hypothetical protein 0.05 OrthoFinder
Sro4136_g353120.1 Contig3023.g24106 Hypothetical protein 0.03 OrthoFinder
Sro471_g149640.1 Contig458.g6177 Hypothetical protein 0.05 OrthoFinder
Sro514_g158140.1 Contig3991.g30655 Hypothetical protein 0.02 OrthoFinder
Sro712_g191290.1 Contig2484.g20334 Harbinger transposase-derived nuclease domain [Interproscan]. 0.04 OrthoFinder
Sro76_g041480.1 Contig184.g2126 Hypothetical protein 0.05 OrthoFinder
Sro996_g229350.1 Contig2630.g21349 Hypothetical protein 0.12 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 149 294
No external refs found!