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  5. Sro1696_g291850.1

Sro1696_g291850.1 (Contig219.g2593)


Aliases : Contig219.g2593

Description : Hypothetical protein


Gene families : OG_01_0000121 (OrthoFinder) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1696_g291850.1

Target Alias Description ECC score Gene Family Method Actions
Sro1172_g248930.1 Contig1295.g12030 Hypothetical protein 0.06 OrthoFinder
Sro1687_g291190.1 Contig3941.g30218 Retrotransposon protein 0.01 OrthoFinder
Sro2313_g322880.1 Contig2128.g17959 Retrotransposon protein 0.01 OrthoFinder
Sro4143_g353160.1 Contig1243.g11621 Hypothetical protein 0.04 OrthoFinder
Sro494_g154220.1 Contig3119.g24787 Hypothetical protein 0.01 OrthoFinder
Sro66_g037090.1 Contig399.g5379 Retrotransposon protein 0.01 OrthoFinder
Sro730_g193960.1 Contig80.g828 Hypothetical protein 0.02 OrthoFinder
Sro833_g208550.1 Contig120.g1361 Retrotransposon protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004520 endodeoxyribonuclease activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment

No InterPro domains available for this sequence

No external refs found!