Sro1696_g291840.1 (Contig219.g2592)

Aliases : Contig219.g2592

Description : Zinc finger, CCHC-type [Interproscan].

Gene families : OG_01_0007512 (OrthoFinder) Phylogenetic Tree(s): OG0007512_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro1696_g291840.1
Cluster	HCCA: Cluster_27

Target	Alias	Description	ECC score	Gene Family Method	Actions
Sro1095_g240730.1	Contig3661.g28263	Hypothetical protein	0.13	OrthoFinder
Sro3509_g348720.1	Contig3794.g29125	Hypothetical protein	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001878	Znf_CCHC	219	235

External Links

No external refs found!