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  5. Sro1695_g291780.1

Sro1695_g291780.1 (Contig3081.g24561)


Aliases : Contig3081.g24561

Description : Phosphoglycolate phosphatase 1A, chloroplastic


Gene families : OG_01_0000850 (OrthoFinder) Phylogenetic Tree(s): OG0000850_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1695_g291780.1
Cluster HCCA: Cluster_219

Target Alias Description ECC score Gene Family Method Actions
Cre06.g271400 30779957, PGP3 Protein modification.dephosphorylation.aspartate-based... 0.02 OrthoFinder
Cz06g14040.t1 No alias HAD-hyrolase-like [Interproscan]. 0.01 OrthoFinder
Dusal.0761s00004.1 33195877 HAD-superfamily hydrolase, subfamily IIA;... 0.01 OrthoFinder
EOD39566 No alias Phosphoglycolate phosphatase [Ensembl]. 0.02 OrthoFinder
OT_08G02370.1 No alias HAD-superfamily hydrolase, subfamily IIA;... 0.01 OrthoFinder
PTI_00G00900.1 No alias HAD-superfamily hydrolase, subfamily IIA;... 0.02 OrthoFinder
TP19G03040.1 No alias HAD-superfamily hydrolase, subfamily IIA;... 0.07 OrthoFinder
Vocar.0040s0079.1 32886195 HAD-hyrolase-like; HAD-superfamily hydrolase, subfamily... 0.02 OrthoFinder
XM_002508593.1 MICPUN_96626, 96626 Phosphoglycolate phosphatase (PGP) 0.02 OrthoFinder
XM_003062717.1 MicpuC2_36042, 36042 Phosphoglycolate phosphatase (PGP) 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495603.1_1601 KAA8495603 Phosphoglycolate phosphatase 2 0.03 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494047.1_3911 KAA8494047 Phosphoglycolate phosphatase 1B, chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0000271 polysaccharide biosynthetic process IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004779 sulfate adenylyltransferase activity IEP Enrichment
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Enrichment
MF GO:0004817 cysteine-tRNA ligase activity IEP Enrichment
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006073 cellular glucan metabolic process IEP Enrichment
BP GO:0006077 (1->6)-beta-D-glucan metabolic process IEP Enrichment
BP GO:0006078 (1->6)-beta-D-glucan biosynthetic process IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009250 glucan biosynthetic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0044042 glucan metabolic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0051273 beta-glucan metabolic process IEP Enrichment
BP GO:0051274 beta-glucan biosynthetic process IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR006357 HAD-SF_hydro_IIA 75 176
No external refs found!